Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NclP09405 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Gm12997-201ENSMUST00000120207 640 ntBASIC18.77■□□□□ 0.6
NclP09405 Gm5863-201ENSMUST00000121760 1008 ntBASIC18.77■□□□□ 0.6
NclP09405 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC18.77■□□□□ 0.6
NclP09405 AA914427-201ENSMUST00000193194 1166 ntBASIC18.77■□□□□ 0.6
NclP09405 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC18.77■□□□□ 0.6
NclP09405 Gm8712-201ENSMUST00000221090 701 ntBASIC18.77■□□□□ 0.6
NclP09405 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NclP09405 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
NclP09405 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NclP09405 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NclP09405 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NclP09405 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC18.77■□□□□ 0.59
NclP09405 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NclP09405 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NclP09405 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NclP09405 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NclP09405 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
NclP09405 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.76■□□□□ 0.59
NclP09405 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
NclP09405 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC18.76■□□□□ 0.59
NclP09405 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NclP09405 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NclP09405 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC18.76■□□□□ 0.59
NclP09405 Gm8885-201ENSMUST00000189382 598 ntBASIC18.76■□□□□ 0.59
NclP09405 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.76■□□□□ 0.59
NclP09405 CT030182.1-201ENSMUST00000225935 533 ntBASIC18.76■□□□□ 0.59
NclP09405 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NclP09405 AC123857.2-201ENSMUST00000225756 1582 ntBASIC18.76■□□□□ 0.59
NclP09405 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NclP09405 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC18.75■□□□□ 0.59
NclP09405 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NclP09405 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NclP09405 AC161537.1-201ENSMUST00000226199 1015 ntBASIC18.75■□□□□ 0.59
NclP09405 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC18.75■□□□□ 0.59
NclP09405 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC18.75■□□□□ 0.59
NclP09405 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.75■□□□□ 0.59
NclP09405 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NclP09405 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NclP09405 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NclP09405 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NclP09405 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NclP09405 Gm14999-201ENSMUST00000121039 624 ntBASIC18.74■□□□□ 0.59
NclP09405 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18.74■□□□□ 0.59
NclP09405 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
NclP09405 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.74■□□□□ 0.59
NclP09405 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms