Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hoxa3P02831 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Hoxa3P02831 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm8738-201ENSMUST00000172606 329 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm37259-201ENSMUST00000193903 849 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.63□□□□□ -0.71
Hoxa3P02831 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm5781-201ENSMUST00000219792 443 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Hoxa3P02831 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.63□□□□□ -0.71
Hoxa3P02831 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hoxa3P02831 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm22323-201ENSMUST00000103832 109 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.62□□□□□ -0.71
Hoxa3P02831 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm14704-201ENSMUST00000120300 874 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm2991-201ENSMUST00000173338 480 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Mospd4-201ENSMUST00000180618 576 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.62□□□□□ -0.71
Hoxa3P02831 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hoxa3P02831 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hoxa3P02831 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Hoxa3P02831 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hoxa3P02831 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms