Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Gm25261-201ENSMUST00000157416 134 ntBASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Igh-VJ558P01758 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm14660-201ENSMUST00000119809 575 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm12502-201ENSMUST00000120197 444 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm11597-201ENSMUST00000121423 964 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm7809-201ENSMUST00000153199 742 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm8018-201ENSMUST00000173536 789 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm3890-201ENSMUST00000182416 207 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm24136-201ENSMUST00000083374 165 ntBASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms