Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.04□□□□□ -0.32
CopeO89079 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.04□□□□□ -0.32
CopeO89079 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.04□□□□□ -0.32
CopeO89079 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CopeO89079 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
CopeO89079 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopeO89079 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.03□□□□□ -0.32
CopeO89079 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.03□□□□□ -0.32
CopeO89079 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.03□□□□□ -0.32
CopeO89079 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.03□□□□□ -0.32
CopeO89079 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
CopeO89079 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.03□□□□□ -0.32
CopeO89079 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.03□□□□□ -0.32
CopeO89079 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.03□□□□□ -0.32
CopeO89079 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CopeO89079 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CopeO89079 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopeO89079 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopeO89079 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CopeO89079 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CopeO89079 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopeO89079 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CopeO89079 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopeO89079 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.02□□□□□ -0.32
CopeO89079 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.02□□□□□ -0.32
CopeO89079 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CopeO89079 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopeO89079 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CopeO89079 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CopeO89079 Gm27390-201ENSMUST00000184516 176 ntBASIC13.02□□□□□ -0.33
CopeO89079 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.02□□□□□ -0.33
CopeO89079 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.02□□□□□ -0.33
CopeO89079 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.02□□□□□ -0.33
CopeO89079 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.02□□□□□ -0.33
CopeO89079 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.02□□□□□ -0.33
CopeO89079 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.02□□□□□ -0.33
CopeO89079 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms