Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mir1982-201ENSMUST00000157368 74 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Gm4271-201ENSMUST00000174444 973 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm45784-201ENSMUST00000188360 142 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Gm45841-201ENSMUST00000207700 164 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.15□□□□□ -0.46
Hcn1O88704 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.15□□□□□ -0.46
Hcn1O88704 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.15□□□□□ -0.46
Hcn1O88704 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hcn1O88704 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hcn1O88704 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hcn1O88704 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hcn1O88704 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Hcn1O88704 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hcn1O88704 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm13369-201ENSMUST00000119442 987 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Gm14660-201ENSMUST00000119809 575 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Gm13123-201ENSMUST00000122173 492 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm37497-201ENSMUST00000195830 798 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.14□□□□□ -0.47
Hcn1O88704 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hcn1O88704 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hcn1O88704 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.14□□□□□ -0.47
Hcn1O88704 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hcn1O88704 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hcn1O88704 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hcn1O88704 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms