Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.02■□□□□ -0
Smarce1O54941 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.02■□□□□ -0
Smarce1O54941 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarce1O54941 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.02■□□□□ -0
Smarce1O54941 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarce1O54941 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.02■□□□□ -0
Smarce1O54941 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Gm16479-201ENSMUST00000121706 932 ntBASIC15.02■□□□□ -0
Smarce1O54941 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarce1O54941 Gm5866-201ENSMUST00000177881 973 ntBASIC15.02■□□□□ -0
Smarce1O54941 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.02■□□□□ -0
Smarce1O54941 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.02■□□□□ -0
Smarce1O54941 Gm37042-201ENSMUST00000193816 581 ntBASIC15.02■□□□□ -0
Smarce1O54941 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.02■□□□□ -0
Smarce1O54941 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarce1O54941 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarce1O54941 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.02■□□□□ -0
Smarce1O54941 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.02■□□□□ -0
Smarce1O54941 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.02■□□□□ -0
Smarce1O54941 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarce1O54941 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smarce1O54941 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smarce1O54941 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarce1O54941 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Smarce1O54941 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm17208-201ENSMUST00000168388 535 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm10576-201ENSMUST00000191927 825 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarce1O54941 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarce1O54941 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarce1O54941 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarce1O54941 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarce1O54941 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Daam2-202ENSMUST00000224595 1926 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarce1O54941 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Pck2-205ENSMUST00000226352 2784 ntBASIC15.01□□□□□ -0.01
Smarce1O54941 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarce1O54941 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smarce1O54941 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Gm14760-201ENSMUST00000121831 999 ntBASIC15□□□□□ -0.01
Smarce1O54941 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Smarce1O54941 Gm27390-201ENSMUST00000184516 176 ntBASIC15□□□□□ -0.01
Smarce1O54941 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarce1O54941 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Nupl1-206ENSMUST00000225111 2936 ntBASIC15□□□□□ -0.01
Smarce1O54941 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms