Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Itgb3O54890 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Itgb3O54890 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Gm22323-201ENSMUST00000103832 109 ntBASIC13.41□□□□□ -0.26
Itgb3O54890 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.41□□□□□ -0.26
Itgb3O54890 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Itgb3O54890 Gm13315-201ENSMUST00000120376 991 ntBASIC13.41□□□□□ -0.26
Itgb3O54890 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.41□□□□□ -0.26
Itgb3O54890 Gm25043-201ENSMUST00000158604 212 ntBASIC13.41□□□□□ -0.26
Itgb3O54890 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Itgb3O54890 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Itgb3O54890 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.41□□□□□ -0.26
Itgb3O54890 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.41□□□□□ -0.26
Itgb3O54890 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Itgb3O54890 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Itgb3O54890 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.41□□□□□ -0.26
Itgb3O54890 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Itgb3O54890 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Itgb3O54890 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.4□□□□□ -0.26
Itgb3O54890 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm14726-201ENSMUST00000120623 896 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gm11597-201ENSMUST00000121423 964 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Itgb3O54890 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.4□□□□□ -0.26
Itgb3O54890 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm20482-202ENSMUST00000174729 825 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gm27023-201ENSMUST00000182372 285 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm27243-201ENSMUST00000183964 521 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gm27320-201ENSMUST00000184892 109 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Itgb3O54890 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.4□□□□□ -0.26
Itgb3O54890 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Itgb3O54890 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Itgb3O54890 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Itgb3O54890 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.39□□□□□ -0.27
Itgb3O54890 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.39□□□□□ -0.27
Itgb3O54890 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Itgb3O54890 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Itgb3O54890 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms