Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
B020004C17RikJ3QP07 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Gm45550-201ENSMUST00000209380 946 ntBASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
B020004C17RikJ3QP07 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm14460-201ENSMUST00000121511 639 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm15881-201ENSMUST00000148792 942 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm8100-201ENSMUST00000182906 988 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm37246-201ENSMUST00000192665 835 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm4157-201ENSMUST00000211647 679 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm807-202ENSMUST00000224929 408 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms