Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.98□□□□□ -0.33
Trim55G3X8Y1 AA619741-201ENSMUST00000195095 646 ntBASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Mir497b-201ENSMUST00000093601 125 ntBASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim55G3X8Y1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm9385-201ENSMUST00000117563 472 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm7063-201ENSMUST00000186840 981 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm10576-201ENSMUST00000191927 825 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm17968-201ENSMUST00000194902 784 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.97□□□□□ -0.33
Trim55G3X8Y1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Auts2-212ENSMUST00000178555 309 ntBASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gm5177-201ENSMUST00000183092 997 ntBASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim55G3X8Y1 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms