Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm23251-201ENSMUST00000103773 110 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm25880-201ENSMUST00000104331 132 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm15881-201ENSMUST00000148792 942 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm8018-201ENSMUST00000173536 789 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm23153-201ENSMUST00000175323 313 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm4607-201ENSMUST00000206649 577 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.22■□□□□ 0.03
NpcdF8VQB8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NpcdF8VQB8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.21■□□□□ 0.03
NpcdF8VQB8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm14644-201ENSMUST00000116671 647 ntBASIC15.21■□□□□ 0.03
NpcdF8VQB8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm37905-201ENSMUST00000195310 341 ntBASIC15.21■□□□□ 0.03
NpcdF8VQB8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.21■□□□□ 0.03
NpcdF8VQB8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NpcdF8VQB8 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.21■□□□□ 0.02
NpcdF8VQB8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
NpcdF8VQB8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NpcdF8VQB8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NpcdF8VQB8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NpcdF8VQB8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NpcdF8VQB8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NpcdF8VQB8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.2■□□□□ 0.02
NpcdF8VQB8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Gm28324-201ENSMUST00000187913 264 ntBASIC15.2■□□□□ 0.02
NpcdF8VQB8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.2■□□□□ 0.02
NpcdF8VQB8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.2■□□□□ 0.02
NpcdF8VQB8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms