Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh9F8VPK8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh9F8VPK8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh9F8VPK8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh9F8VPK8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdh9F8VPK8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm13369-201ENSMUST00000119442 987 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms