Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm12337-201ENSMUST00000119634 400 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm12712-201ENSMUST00000120676 801 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm8343-201ENSMUST00000182705 994 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm6855-201ENSMUST00000206307 790 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm45575-201ENSMUST00000210283 548 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm18514-201ENSMUST00000218980 436 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm16380-201ENSMUST00000077997 478 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm22920-201ENSMUST00000102175 109 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm37852-201ENSMUST00000193027 350 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm23680-201ENSMUST00000083162 164 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc188F6WEU2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm13351-201ENSMUST00000118087 414 ntBASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc188F6WEU2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms