Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3543D3Z235 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3543D3Z235 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm45331-201ENSMUST00000209868 554 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm19309-201ENSMUST00000218295 205 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm7399-201ENSMUST00000032395 858 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.49□□□□□ -0.57
Gm3543D3Z235 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3543D3Z235 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm11978-201ENSMUST00000122315 466 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms