Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.35□□□□□ -0.43
Clip3B9EHT4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm28693-202ENSMUST00000190758 331 ntBASIC12.35□□□□□ -0.43
Clip3B9EHT4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.35□□□□□ -0.43
Clip3B9EHT4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clip3B9EHT4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm17208-201ENSMUST00000168388 535 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm19163-201ENSMUST00000223313 780 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.34□□□□□ -0.43
Clip3B9EHT4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clip3B9EHT4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clip3B9EHT4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clip3B9EHT4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gm26927-201ENSMUST00000182385 965 ntBASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.33□□□□□ -0.44
Clip3B9EHT4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip3B9EHT4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms