Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 AU022133-201ENSMUST00000200601 873 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm8385-201ENSMUST00000058999 643 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Chd3B1AR17 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm27341-201ENSMUST00000183570 106 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Mir6927-201ENSMUST00000184494 71 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd3B1AR17 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd3B1AR17 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.39□□□□□ -0.43
Chd3B1AR17 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Chd3B1AR17 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd3B1AR17 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd3B1AR17 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.38□□□□□ -0.43
Chd3B1AR17 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd3B1AR17 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chd3B1AR17 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chd3B1AR17 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.37□□□□□ -0.43
Chd3B1AR17 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Chd3B1AR17 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd3B1AR17 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms