Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm45085-201ENSMUST00000209100 441 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm7627-201ENSMUST00000183205 999 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gm2474-201ENSMUST00000195162 559 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.15□□□□□ -0.78
Chd6A3KFM7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Chd6A3KFM7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.15□□□□□ -0.79
Chd6A3KFM7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Chd6A3KFM7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23062-201ENSMUST00000102349 110 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm13351-201ENSMUST00000118087 414 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23400-201ENSMUST00000174994 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm26463-201ENSMUST00000175065 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm24332-201ENSMUST00000175102 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25959-201ENSMUST00000175112 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm22475-201ENSMUST00000175169 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm22903-201ENSMUST00000175193 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25070-201ENSMUST00000175237 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm24159-201ENSMUST00000175264 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25299-201ENSMUST00000175283 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23798-201ENSMUST00000175560 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23802-201ENSMUST00000175565 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25708-201ENSMUST00000177687 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm24370-201ENSMUST00000178007 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23049-201ENSMUST00000178068 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm28019-201ENSMUST00000178138 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25571-201ENSMUST00000178322 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25355-201ENSMUST00000178456 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm24975-201ENSMUST00000178492 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23189-201ENSMUST00000178954 102 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm25100-201ENSMUST00000179750 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm23064-201ENSMUST00000179866 101 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.14□□□□□ -0.79
Chd6A3KFM7 Gm37782-201ENSMUST00000194879 678 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.14□□□□□ -0.79
Chd6A3KFM7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms