Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav12d-1A0N8R0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm14704-201ENSMUST00000120300 874 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm28631-201ENSMUST00000190740 334 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm8099-201ENSMUST00000200510 742 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Paupar-201ENSMUST00000194826 3482 ntBASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav12d-1A0N8R0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav12d-1A0N8R0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms