Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Gm27701-201ENSMUST00000184498 110 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Gm38671-201ENSMUST00000200573 130 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Mir686-201ENSMUST00000102174 109 ntBASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm23984-201ENSMUST00000157139 203 ntBASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5-4A0A075B652 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms