Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lhx9Q9WUH2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Gm14726-201ENSMUST00000120623 896 ntBASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lhx9Q9WUH2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm18827-201ENSMUST00000188341 790 ntBASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.04□□□□□ -0.48
Lhx9Q9WUH2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms