Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm12384-201ENSMUST00000119228 919 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Gm40466-201ENSMUST00000212174 422 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim3Q9R1R2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trim3Q9R1R2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Gm13369-201ENSMUST00000119442 987 ntBASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Snora78-201ENSMUST00000158630 128 ntBASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim3Q9R1R2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Gm13123-201ENSMUST00000122173 492 ntBASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim3Q9R1R2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms