Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Gm45784-201ENSMUST00000188360 142 ntBASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Gm4768-201ENSMUST00000206199 686 ntBASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Gm40466-201ENSMUST00000212174 422 ntBASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm37042-201ENSMUST00000193816 581 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm10268-201ENSMUST00000085340 555 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prpf40aQ9R1C7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm13226-201ENSMUST00000117838 404 ntBASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm27682-201ENSMUST00000183930 110 ntBASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
Prpf40aQ9R1C7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prpf40aQ9R1C7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 156.5 ms