Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3fQ9JIG4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3fQ9JIG4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ppp1r3fQ9JIG4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3fQ9JIG4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp1r3fQ9JIG4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp1r3fQ9JIG4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm23363-201ENSMUST00000175024 79 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ppp1r3fQ9JIG4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp1r3fQ9JIG4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms