Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Gm27390-201ENSMUST00000184516 176 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Gm46209-201ENSMUST00000217912 553 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm22175-201ENSMUST00000175007 78 ntBASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm21470-201ENSMUST00000187680 696 ntBASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm19184-201ENSMUST00000196798 928 ntBASIC12.17□□□□□ -0.46
Ube4bQ9ES00 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube4bQ9ES00 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube4bQ9ES00 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms