Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tubb3Q9ERD7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms