Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-4Q9EQM3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-4Q9EQM3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-4Q9EQM3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms