Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chmp4cQ9D7F7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm16372-201ENSMUST00000073088 450 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chmp4cQ9D7F7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4cQ9D7F7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Gm11618-201ENSMUST00000117946 267 ntBASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Gm7287-201ENSMUST00000205267 602 ntBASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4cQ9D7F7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms