Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm44262-201ENSMUST00000204969 372 ntBASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm13315-201ENSMUST00000120376 991 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm24845-201ENSMUST00000158034 109 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm44651-201ENSMUST00000207343 372 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.1■□□□□ 0.01
Stag1Q9D3E6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag1Q9D3E6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm14208-201ENSMUST00000119645 678 ntBASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm14832-201ENSMUST00000121289 322 ntBASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Stag1Q9D3E6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
Stag1Q9D3E6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms