Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.74□□□□□ -0.53
Trim13Q9CYB0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm21854-201ENSMUST00000179901 471 ntBASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm27989-201ENSMUST00000184721 107 ntBASIC11.73□□□□□ -0.53
Trim13Q9CYB0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim13Q9CYB0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Gm42550-201ENSMUST00000201553 960 ntBASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Gm26315-201ENSMUST00000083890 321 ntBASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms