Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssu72Q9CY97 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Gm23363-201ENSMUST00000175024 79 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Mir8102-201ENSMUST00000184148 139 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Gm18307-201ENSMUST00000206864 949 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ssu72Q9CY97 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ssu72Q9CY97 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms