Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm37917-201ENSMUST00000194711 392 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm44397-201ENSMUST00000195950 113 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm6983-201ENSMUST00000214912 628 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm8617-201ENSMUST00000118796 2222 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm10686-201ENSMUST00000215389 3247 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Auts2-212ENSMUST00000178555 309 ntBASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm27437-201ENSMUST00000183429 107 ntBASIC11.99□□□□□ -0.49
Ska1Q9CPV1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.99□□□□□ -0.49
Ska1Q9CPV1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ska1Q9CPV1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms