Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm5035-201ENSMUST00000215581 927 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim11Q99PQ2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Gm7561-201ENSMUST00000211203 886 ntBASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Gm6091-201ENSMUST00000098307 165 ntBASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms