Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm6458-201ENSMUST00000211573 635 ntBASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim8Q99PJ2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gm16202-201ENSMUST00000117532 544 ntBASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms