Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd3Q99LE3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm21769-201ENSMUST00000211922 111 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm45925-201ENSMUST00000218882 744 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd3Q99LE3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms