Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdk9Q99J95 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdk9Q99J95 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdk9Q99J95 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.79□□□□□ -0.36
Cdk9Q99J95 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdk9Q99J95 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm5866-201ENSMUST00000177881 973 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.78□□□□□ -0.36
Cdk9Q99J95 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdk9Q99J95 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk9Q99J95 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gm24694-201ENSMUST00000180054 110 ntBASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gm27663-201ENSMUST00000184839 110 ntBASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gm7730-201ENSMUST00000212486 454 ntBASIC12.77□□□□□ -0.37
Cdk9Q99J95 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms