Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.22□□□□□ -0.61
Sf3b5Q923D4 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm10434-201ENSMUST00000101158 471 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm6023-201ENSMUST00000118217 606 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm11964-201ENSMUST00000120982 444 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm26035-201ENSMUST00000083065 308 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Gm10478-201ENSMUST00000084451 396 ntBASIC11.21□□□□□ -0.61
Sf3b5Q923D4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sf3b5Q923D4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Gm45880-201ENSMUST00000213041 853 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Gm22058-201ENSMUST00000083393 310 ntBASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b5Q923D4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms