Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb18Q91Y02 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb18Q91Y02 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb18Q91Y02 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm12058-201ENSMUST00000118614 437 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm13875-201ENSMUST00000120162 282 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb18Q91Y02 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb18Q91Y02 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm14277-201ENSMUST00000121195 360 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm3096-201ENSMUST00000185770 364 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm3786-201ENSMUST00000202659 378 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm45925-201ENSMUST00000218882 744 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb18Q91Y02 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb18Q91Y02 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb18Q91Y02 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.26□□□□□ -0.29
Pcdhb18Q91Y02 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb18Q91Y02 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb18Q91Y02 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms