Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb6Q91XZ4 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb6Q91XZ4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Daam2-202ENSMUST00000224595 1926 ntBASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Dctn4-202ENSMUST00000223590 1530 ntBASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm12502-201ENSMUST00000120197 444 ntBASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Gm2420-201ENSMUST00000119864 2149 ntBASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms