Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm4875-201ENSMUST00000118257 786 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm17837-201ENSMUST00000186435 985 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm6888-201ENSMUST00000221983 706 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa1Q8VEE4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gm13453-201ENSMUST00000118708 357 ntBASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms