Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm27892-201ENSMUST00000185017 106 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm37042-201ENSMUST00000193816 581 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps39Q8R5L3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm12203-201ENSMUST00000118235 598 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm13369-201ENSMUST00000119442 987 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm12209-201ENSMUST00000120089 596 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm27486-201ENSMUST00000184923 80 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps39Q8R5L3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms