Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Gm5354-201ENSMUST00000182417 973 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Gm27306-201ENSMUST00000183970 107 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Gm28760-201ENSMUST00000185995 736 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Mir339-201ENSMUST00000083659 96 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup35Q8R4R6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Gm35960-201ENSMUST00000202712 767 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms