Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Gm14660-201ENSMUST00000119809 575 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Gm32025-201ENSMUST00000217960 307 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.97□□□□□ -0.49
Clrn1Q8K445 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clrn1Q8K445 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Mir1982-201ENSMUST00000157368 74 ntBASIC11.96□□□□□ -0.49
Clrn1Q8K445 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn1Q8K445 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Clrn1Q8K445 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.95□□□□□ -0.5
Clrn1Q8K445 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.95□□□□□ -0.5
Clrn1Q8K445 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms