Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cnot3Q8K0V4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.91□□□□□ -0.5
Cnot3Q8K0V4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Gm11978-201ENSMUST00000122315 466 ntBASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Gm6458-201ENSMUST00000211573 635 ntBASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cnot3Q8K0V4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.9□□□□□ -0.51
Cnot3Q8K0V4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cnot3Q8K0V4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cnot3Q8K0V4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gm20445-201ENSMUST00000061905 565 ntBASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cnot3Q8K0V4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.88□□□□□ -0.51
Cnot3Q8K0V4 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms