Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Zc3h3Q8CHP0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Zc3h3Q8CHP0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Zc3h3Q8CHP0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Zc3h3Q8CHP0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Zc3h3Q8CHP0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Zc3h3Q8CHP0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zc3h3Q8CHP0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm14219-201ENSMUST00000120414 288 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm2875-201ENSMUST00000211333 360 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm19994-201ENSMUST00000217086 586 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm5455-201ENSMUST00000058710 715 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zc3h3Q8CHP0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms