Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Gm45880-201ENSMUST00000213041 853 ntBASIC15.29■□□□□ 0.04
Brf1Q8CFK2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Gm9823-201ENSMUST00000051212 327 ntBASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Gm26035-201ENSMUST00000083065 308 ntBASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Brf1Q8CFK2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm12742-201ENSMUST00000117326 410 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm38002-201ENSMUST00000193255 180 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm19309-201ENSMUST00000218295 205 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.28■□□□□ 0.04
Brf1Q8CFK2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Brf1Q8CFK2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm24548-201ENSMUST00000158650 108 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm27572-201ENSMUST00000183702 255 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm43133-201ENSMUST00000197472 463 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Gm5904-201ENSMUST00000210286 865 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Brf1Q8CFK2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Brf1Q8CFK2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.26■□□□□ 0.03
Brf1Q8CFK2 Gm38158-201ENSMUST00000194617 339 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms