Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm9002-201ENSMUST00000178437 499 ntBASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc38Q8CDN8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm15806-201ENSMUST00000120696 955 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm17208-201ENSMUST00000168388 535 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm10146-201ENSMUST00000072739 309 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc38Q8CDN8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Gm26185-201ENSMUST00000157692 266 ntBASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms