Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc60Q8C4J0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Ccdc60Q8C4J0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccdc60Q8C4J0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc60Q8C4J0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms