Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm38223-201ENSMUST00000194484 695 ntBASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm42550-201ENSMUST00000201553 960 ntBASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm17330-201ENSMUST00000221047 165 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rft1Q8C3B8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rft1Q8C3B8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rft1Q8C3B8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms