Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm21854-201ENSMUST00000179901 471 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm7063-201ENSMUST00000186840 981 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm44855-201ENSMUST00000205725 362 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tsen54Q8C2A2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm6912-201ENSMUST00000117218 544 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms