Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.83□□□□□ -0.35
Usp43Q8BUM9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp43Q8BUM9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp43Q8BUM9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms