Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm11531-201ENSMUST00000117614 555 ntBASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap1Q8BTW8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm13736-201ENSMUST00000119272 253 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm37201-201ENSMUST00000191845 523 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm38241-201ENSMUST00000192641 898 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap1Q8BTW8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk5rap1Q8BTW8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms